Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose isomerase | SAMN04490193_2069 | Not Available | Negative | 2112178 - 2113494 | 49407.3 |
| transcriptional regulator, arac family | SAMN04490193_2070 | Not Available | Positive | 2113634 - 2114803 | 42735.7 |
| luxr family transcriptional regulator | SAMN04490193_2071 | Not Available | Negative | 2114800 - 2115465 | 25242.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04490193_2072 | Not Available | Positive | 2115730 - 2116428 | 25683.7 |
| hypothetical protein | SAMN04490193_2073 | Not Available | Negative | 2116704 - 2117012 | 11095.1 |
| quinate dehydrogenase (quinone) | SAMN04490193_2075 | Not Available | Negative | 2117436 - 2119844 | 84734.7 |
| mn2+ and fe2+ transporters of the nramp family | SAMN04490193_2076 | Not Available | Positive | 2120089 - 2121390 | 47196.4 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN04490193_2077 | Not Available | Negative | 2121441 - 2122484 | 38759.5 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04490193_2078 | Not Available | Negative | 2122541 - 2123026 | 17230.7 |
| nucleobase:cation symporter-1, ncs1 family | SAMN04490193_2079 | Not Available | Positive | 2123348 - 2124754 | 50206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





