Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase and inactivated derivatives, is30 family | SAMN04490193_2059 | Not Available | Positive | 2098853 - 2100001 | 44105.3 |
| pectin lyase | SAMN04490193_2060 | Not Available | Positive | 2100354 - 2101292 | 34179.0 |
| levansucrase | SAMN04490193_2061 | Not Available | Positive | 2101544 - 2102794 | 46111.9 |
| methyl-accepting chemotaxis protein | SAMN04490193_2062 | Not Available | Positive | 2103006 - 2104991 | 71417.8 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04490193_2063 | Not Available | Positive | 2105009 - 2105929 | 33044.0 |
| major facilitator superfamily protein | SAMN04490193_2064 | Not Available | Negative | 2105973 - 2107421 | 48964.0 |
| merr family transcriptional regulator, redox-sensitive transcriptional activator soxr | SAMN04490193_2065 | Not Available | Positive | 2107510 - 2107962 | 16468.0 |
| xylose abc transporter membrane protein | SAMN04490193_2066 | Not Available | Negative | 2107968 - 2109104 | 39930.3 |
| xylose abc transporter atp-binding protein | SAMN04490193_2067 | Not Available | Negative | 2109105 - 2110769 | 59787.0 |
| xylose-binding protein | SAMN04490193_2068 | Not Available | Negative | 2110778 - 2111776 | 35925.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





