Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| brna antitoxin of type ii toxin-antitoxin system | SAMN04490193_2039 | Not Available | Negative | 2074333 - 2074680 | 12452.0 |
| cytochrome c, mono-and diheme variants | SAMN04490193_2040 | Not Available | Negative | 2074927 - 2076267 | 48104.9 |
| isoquinoline 1-oxidoreductase, beta subunit | SAMN04490193_2041 | Not Available | Negative | 2076284 - 2078515 | 79634.6 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN04490193_2042 | Not Available | Negative | 2078515 - 2078973 | 15929.1 |
| methyl-accepting chemotaxis protein | SAMN04490193_2043 | Not Available | Positive | 2079331 - 2081292 | 70650.2 |
| lactate dehydrogenase | SAMN04490193_2044 | Not Available | Negative | 2081348 - 2082304 | 33601.7 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04490193_2045 | Not Available | Negative | 2082339 - 2083097 | 26464.0 |
| fumarylpyruvate hydrolase | SAMN04490193_2046 | Not Available | Negative | 2083140 - 2083832 | 24692.4 |
| d-galactonate transporter | SAMN04490193_2047 | Not Available | Negative | 2083931 - 2085280 | 48915.4 |
| arac-type dna-binding protein | SAMN04490193_2048 | Not Available | Positive | 2085833 - 2086765 | 35647.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





