Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane autotransporter barrel domain-containing protein | SAMN04490193_2018 | Not Available | Negative | 2052618 - 2053343 | 28344.9 |
| l-alanine-dl-glutamate epimerase | SAMN04490193_2019 | Not Available | Positive | 2053703 - 2054857 | 42428.6 |
| peptide/nickel transport system substrate-binding protein | SAMN04490193_2020 | Not Available | Positive | 2054943 - 2056553 | 59309.2 |
| peptide/nickel transport system permease protein | SAMN04490193_2021 | Not Available | Positive | 2056574 - 2057611 | 37430.5 |
| peptide/nickel transport system substrate-binding protein | SAMN04490193_2022 | Not Available | Positive | 2057657 - 2059267 | 58989.6 |
| peptide/nickel transport system permease protein | SAMN04490193_2023 | Not Available | Positive | 2059310 - 2060227 | 32503.4 |
| peptide/nickel transport system atp-binding protein | SAMN04490193_2024 | Not Available | Positive | 2060242 - 2061081 | 31208.2 |
| peptide/nickel transport system atp-binding protein | SAMN04490193_2025 | Not Available | Positive | 2061093 - 2061869 | 28823.8 |
| 5-dehydro-4-deoxyglucarate dehydratase | SAMN04490193_2026 | Not Available | Positive | 2062068 - 2062979 | 32628.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | SAMN04490193_2027 | Not Available | Positive | 2063042 - 2063410 | 13592.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





