Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradation operon regulator, hpar | SAMN04490193_1988 | Not Available | Positive | 2017799 - 2018353 | 20659.1 |
| transcriptional regulator, arac family | SAMN04490193_1989 | Not Available | Positive | 2018522 - 2019502 | 36613.0 |
| uncharacterized conserved protein | SAMN04490193_1990 | Not Available | Positive | 2019571 - 2020503 | 33935.2 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_1991 | Not Available | Positive | 2020514 - 2021746 | 42948.2 |
| amidase | SAMN04490193_1992 | Not Available | Positive | 2021763 - 2023211 | 51179.9 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_1993 | Not Available | Negative | 2023274 - 2024137 | 31803.2 |
| heme oxygenase | SAMN04490193_1994 | Not Available | Negative | 2024234 - 2024818 | 21622.6 |
| putative peptide zinc metalloprotease protein | SAMN04490193_1995 | Not Available | Negative | 2024912 - 2027017 | 79398.8 |
| biotin-lipoyl like | SAMN04490193_1996 | Not Available | Negative | 2027014 - 2028336 | 48539.9 |
| rnd family efflux transporter, mfp subunit | SAMN04490193_1997 | Not Available | Negative | 2028333 - 2029118 | 28279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





