Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradation operon regulator, hpar | SAMN04490193_1978 | Not Available | Positive | 2008335 - 2008757 | 16092.8 |
| 2,4-dihydroxyhept-2-enedioate aldolase | SAMN04490193_1979 | Not Available | Negative | 2009301 - 2010104 | 28062.8 |
| 2-oxo-hept-3-ene-1,7-dioate hydratase | SAMN04490193_1980 | Not Available | Negative | 2010118 - 2010921 | 29331.2 |
| sugar phosphate permease | SAMN04490193_1981 | Not Available | Negative | 2010934 - 2012238 | 47004.5 |
| 5-carboxymethyl-2-hydroxymuconate delta isomerase | SAMN04490193_1982 | Not Available | Negative | 2012290 - 2012682 | 14704.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN04490193_1983 | Not Available | Negative | 2012782 - 2013639 | 31774.8 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | SAMN04490193_1984 | Not Available | Negative | 2013788 - 2015248 | 52660.2 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SAMN04490193_1985 | Not Available | Negative | 2015254 - 2016024 | 28576.9 |
| 5-carboxy-2-oxohept-3-enedioate decarboxylase hpag1 subunit | SAMN04490193_1986 | Not Available | Negative | 2016021 - 2016689 | 24118.9 |
| arac family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein | SAMN04490193_1987 | Not Available | Positive | 2016851 - 2017756 | 34678.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





