Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | SAMN04490193_1938 | Not Available | Negative | 1962578 - 1963720 | 40467.8 |
| hypothetical protein | SAMN04490193_1939 | Not Available | Positive | 1963973 - 1965235 | 46123.5 |
| hypothetical protein | SAMN04490193_1940 | Not Available | Positive | 1965353 - 1966690 | 49127.5 |
| putrescine transport system substrate-binding protein | SAMN04490193_1941 | Not Available | Positive | 1966731 - 1967834 | 40631.8 |
| protein of unknown function | SAMN04490193_1942 | Not Available | Positive | 1967877 - 1968356 | 17742.3 |
| dna-binding transcriptional regulator, acrr family | SAMN04490193_1943 | Not Available | Negative | 1968376 - 1968987 | 23210.9 |
| regulatory protein, fis family | SAMN04490193_1944 | Not Available | Negative | 1969086 - 1970843 | 64474.7 |
| benzaldehyde dehydrogenase (nad+) | SAMN04490193_1945 | Not Available | Positive | 1971114 - 1972589 | 51689.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_1946 | Not Available | Positive | 1972647 - 1973414 | 27096.6 |
| uncharacterized conserved protein | SAMN04490193_1947 | Not Available | Positive | 1973496 - 1974443 | 34262.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





