Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN04490193_1914 | Not Available | Negative | 1944219 - 1945739 | 56416.9 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_1915 | Not Available | Positive | 1945927 - 1946844 | 33465.6 |
| general secretion pathway protein j | SAMN04490193_1916 | Not Available | Negative | 1946855 - 1947460 | 22359.6 |
| general secretion pathway protein h | SAMN04490193_1917 | Not Available | Negative | 1947457 - 1947918 | 17185.8 |
| type ii secretion system protein c (gspc) | SAMN04490193_1918 | Not Available | Positive | 1947987 - 1948418 | 14985.3 |
| type ii secretion system protein i (gspi) | SAMN04490193_1919 | Not Available | Negative | 1948423 - 1948809 | 14012.3 |
| type ii secretion system protein g (gspg) | SAMN04490193_1920 | Not Available | Positive | 1948947 - 1949396 | 16477.8 |
| general secretion pathway protein k | SAMN04490193_1921 | Not Available | Positive | 1949405 - 1950328 | 34091.3 |
| type ii secretion system protein l | SAMN04490193_1922 | Not Available | Positive | 1950325 - 1951089 | 26882.4 |
| general secretion pathway protein l | SAMN04490193_1923 | Not Available | Positive | 1951086 - 1951252 | 6213.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





