Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_1819 | Not Available | Positive | 1848944 - 1849060 | 4174.01 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_1820 | Not Available | Positive | 1849050 - 1850249 | 41791.0 |
| vanillate o-demethylase monooxygenase subunit | SAMN04490193_1821 | Not Available | Positive | 1850298 - 1851371 | 39582.9 |
| vanillate o-demethylase monooxygenase subunit | SAMN04490193_1822 | Not Available | Positive | 1851368 - 1852411 | 38652.0 |
| vanillate o-demethylase ferredoxin subunit | SAMN04490193_1823 | Not Available | Positive | 1852411 - 1853364 | 34663.5 |
| cupin domain-containing protein | SAMN04490193_1824 | Not Available | Positive | 1853427 - 1853999 | 20417.1 |
| fumarylacetoacetate (faa) hydrolase | SAMN04490193_1825 | Not Available | Positive | 1853996 - 1854988 | 35782.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN04490193_1826 | Not Available | Positive | 1854979 - 1855986 | 36164.0 |
| kynurenine formamidase | SAMN04490193_1827 | Not Available | Positive | 1855973 - 1856758 | 28862.3 |
| dna-binding transcriptional regulator, fadr family | SAMN04490193_1828 | Not Available | Positive | 1856755 - 1857486 | 26722.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





