Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component beta subunit | SAMN04490193_1751 | Not Available | Positive | 1779648 - 1780637 | 34682.0 |
| biotin-requiring enzyme | SAMN04490193_1752 | Not Available | Positive | 1780664 - 1780894 | 8102.72 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04490193_1753 | Not Available | Positive | 1780917 - 1781675 | 27738.0 |
| protein of unknown function | SAMN04490193_1754 | Not Available | Positive | 1781910 - 1783271 | 50637.5 |
| short chain dehydrogenase | SAMN04490193_1755 | Not Available | Positive | 1783361 - 1784224 | 31148.8 |
| arac-type dna-binding protein | SAMN04490193_1756 | Not Available | Negative | 1784253 - 1785260 | 37149.8 |
| phytoene dehydrogenase-related protein | SAMN04490193_1757 | Not Available | Positive | 1785605 - 1787197 | 57741.4 |
| limonene-1,2-epoxide hydrolase | SAMN04490193_1758 | Not Available | Positive | 1787284 - 1787682 | 15518.6 |
| hypothetical protein | SAMN04490193_1759 | Not Available | Positive | 1787877 - 1788620 | 28654.4 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN04490193_1760 | Not Available | Positive | 1788657 - 1789670 | 37632.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





