Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrating conjugative element membrane protein, pfl_4702 family | SAMN04490193_1694 | Not Available | Negative | 1728221 - 1728592 | 13240.7 |
| integrating conjugative element protein, pfl_4701 family | SAMN04490193_1695 | Not Available | Negative | 1728610 - 1728849 | 8591.56 |
| hypothetical protein | SAMN04490193_1696 | Not Available | Positive | 1729177 - 1729737 | 20496.6 |
| acyl-coa dehydrogenase | SAMN04490193_1697 | Not Available | Positive | 1729753 - 1730922 | 43251.4 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04490193_1698 | Not Available | Positive | 1730990 - 1731946 | 35417.8 |
| homoprotocatechuate degradation operon regulator, hpar | SAMN04490193_1700 | Not Available | Positive | 1732483 - 1732908 | 16207.0 |
| 2,4-dihydroxyhept-2-enedioate aldolase | SAMN04490193_1701 | Not Available | Negative | 1732941 - 1733741 | 28394.3 |
| 2-oxohept-3-enedioate hydratase | SAMN04490193_1702 | Not Available | Negative | 1733760 - 1734563 | 29368.3 |
| sugar phosphate permease | SAMN04490193_1703 | Not Available | Negative | 1734576 - 1735880 | 47318.8 |
| 5-carboxymethyl-2-hydroxymuconate delta isomerase | SAMN04490193_1704 | Not Available | Negative | 1735930 - 1736322 | 14747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





