Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_1640 | Not Available | Negative | 1675583 - 1676614 | 36524.5 |
| predicted amidohydrolase | SAMN04490193_1641 | Not Available | Negative | 1676767 - 1677654 | 32608.8 |
| flavin containing amine oxidoreductase | SAMN04490193_1642 | Not Available | Negative | 1677731 - 1679725 | 74977.0 |
| predicted rna binding protein ycfa, dsrbd-like fold, hica-like mrna interferase family | SAMN04490193_1643 | Not Available | Positive | 1680063 - 1680230 | 6119.56 |
| predicted nuclease of the rnase h fold, hicb family | SAMN04490193_1644 | Not Available | Positive | 1680285 - 1680686 | 14478.0 |
| peptidylprolyl isomerase | SAMN04490193_1645 | Not Available | Positive | 1680966 - 1681310 | 12535.1 |
| mg2+-importing atpase | SAMN04490193_1646 | Not Available | Positive | 1681914 - 1684619 | 99666.1 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN04490193_1647 | Not Available | Positive | 1684636 - 1685352 | 25086.3 |
| two component transcriptional regulator, luxr family | SAMN04490193_1648 | Not Available | Positive | 1685621 - 1686250 | 23399.7 |
| two-component system, narl family, sensor histidine kinase evgs | SAMN04490193_1649 | Not Available | Positive | 1686252 - 1689866 | 132723.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





