Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMN04490193_1600 | Not Available | Positive | 1629929 - 1630747 | 29090.8 |
| hypothetical protein | SAMN04490193_1601 | Not Available | Negative | 1630806 - 1631456 | 23927.7 |
| hypothetical protein | SAMN04490193_1602 | Not Available | Positive | 1631630 - 1632139 | 18782.8 |
| type iii restriction enzyme, res subunit | SAMN04490193_1603 | Not Available | Negative | 1632197 - 1634188 | 75640.4 |
| dna replication atp-dependent helicase dna2 | SAMN04490193_1604 | Not Available | Negative | 1634185 - 1635918 | 64438.1 |
| serine/threonine transporter | SAMN04490193_1605 | Not Available | Negative | 1636087 - 1637307 | 41844.6 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_1606 | Not Available | Positive | 1637540 - 1638697 | 40172.6 |
| transcriptional regulator, lysr family | SAMN04490193_1607 | Not Available | Negative | 1638702 - 1639604 | 33369.4 |
| hypothetical protein | SAMN04490193_1608 | Not Available | Positive | 1639736 - 1639990 | 9033.55 |
| membrane protein terc, possibly involved in tellurium resistance | SAMN04490193_1609 | Not Available | Positive | 1640020 - 1640769 | 27002.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





