Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_1580 | Not Available | Positive | 1608655 - 1609437 | 29344.1 |
| lipase (class 3) | SAMN04490193_1581 | Not Available | Positive | 1609450 - 1611600 | 81180.2 |
| cytosine deaminase | SAMN04490193_1582 | Not Available | Negative | 1611610 - 1612845 | 45532.4 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04490193_1583 | Not Available | Negative | 1612873 - 1614078 | 43950.6 |
| cytosine permease | SAMN04490193_1584 | Not Available | Negative | 1614075 - 1615337 | 44536.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04490193_1585 | Not Available | Negative | 1615528 - 1616151 | 23079.4 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04490193_1586 | Not Available | Negative | 1616248 - 1616604 | 13661.3 |
| hypothetical protein | SAMN04490193_1587 | Not Available | Negative | 1616681 - 1617760 | 39871.3 |
| peptidase propeptide and ypeb domain-containing protein | SAMN04490193_1588 | Not Available | Positive | 1617955 - 1618257 | 10665.5 |
| peptidase propeptide and ypeb domain-containing protein | SAMN04490193_1589 | Not Available | Positive | 1618257 - 1618568 | 11463.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





