Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose 1-dehydrogenase | SAMN04490193_1560 | Not Available | Negative | 1587269 - 1588069 | 27895.4 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04490193_1561 | Not Available | Positive | 1588374 - 1590260 | 69616.0 |
| hypothetical protein | SAMN04490193_1562 | Not Available | Positive | 1590257 - 1590985 | 28582.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04490193_1563 | Not Available | Positive | 1590996 - 1591721 | 26097.4 |
| hypothetical protein | SAMN04490193_1564 | Not Available | Positive | 1591718 - 1592854 | 41038.0 |
| glycine/sarcosine n-methyltransferase | SAMN04490193_1565 | Not Available | Positive | 1592862 - 1593632 | 29003.3 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_1566 | Not Available | Positive | 1593643 - 1594872 | 43520.7 |
| adenylylsulfate kinase | SAMN04490193_1567 | Not Available | Positive | 1594869 - 1595483 | 22516.8 |
| putative stress-induced transcription regulator | SAMN04490193_1568 | Not Available | Positive | 1595580 - 1596215 | 23846.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490193_1569 | Not Available | Positive | 1596307 - 1596807 | 19561.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





