Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase (gdp) /mannose-6-phosphate isomerase, type 2 | SAMN04490193_1550 | Not Available | Negative | 1574392 - 1575852 | 53618.0 |
| undecaprenyl-phosphate glucose phosphotransferase | SAMN04490193_1551 | Not Available | Negative | 1575852 - 1577291 | 54888.9 |
| outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid | SAMN04490193_1552 | Not Available | Negative | 1577722 - 1580208 | 90326.8 |
| fecr family protein | SAMN04490193_1553 | Not Available | Negative | 1580315 - 1581265 | 35316.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490193_1554 | Not Available | Negative | 1581252 - 1581767 | 19757.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04490193_1555 | Not Available | Positive | 1581928 - 1582557 | 22260.3 |
| cyclohexyl-isocyanide hydratase | SAMN04490193_1556 | Not Available | Negative | 1582739 - 1583419 | 23997.0 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04490193_1557 | Not Available | Positive | 1583510 - 1584478 | 34764.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04490193_1558 | Not Available | Negative | 1584475 - 1585374 | 33192.4 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN04490193_1559 | Not Available | Negative | 1585450 - 1587276 | 68471.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





