Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-terminal processing peptidase-1. serine peptidase. merops family s41a | SAMN04490193_1495 | Not Available | Negative | 1518457 - 1520538 | 77714.9 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN04490193_1496 | Not Available | Positive | 1520677 - 1521639 | 33608.6 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN04490193_1497 | Not Available | Negative | 1521737 - 1522390 | 24488.2 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04490193_1498 | Not Available | Negative | 1522421 - 1523410 | 36209.9 |
| putative spermidine/putrescine transport system permease protein | SAMN04490193_1499 | Not Available | Negative | 1523407 - 1524207 | 29484.9 |
| putative spermidine/putrescine transport system permease protein | SAMN04490193_1500 | Not Available | Negative | 1524194 - 1525039 | 30993.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04490193_1501 | Not Available | Negative | 1525036 - 1525842 | 29924.5 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04490193_1502 | Not Available | Negative | 1526136 - 1527212 | 38562.7 |
| dna-binding transcriptional regulator, gntr family | SAMN04490193_1503 | Not Available | Positive | 1527560 - 1528273 | 26909.6 |
| abc-type zn uptake system znuabc, zn-binding component znua | SAMN04490193_1504 | Not Available | Negative | 1528382 - 1529305 | 32088.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





