Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN04490193_1467 | Not Available | Positive | 1486853 - 1487983 | 39353.3 |
| multidrug efflux pump | SAMN04490193_1468 | Not Available | Positive | 1487997 - 1491059 | 109400.0 |
| multidrug efflux pump | SAMN04490193_1469 | Not Available | Positive | 1491059 - 1494187 | 111452.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04490193_1470 | Not Available | Positive | 1494184 - 1495605 | 50377.4 |
| methyl-accepting chemotaxis protein | SAMN04490193_1471 | Not Available | Positive | 1496117 - 1497742 | 58160.9 |
| hypothetical protein | SAMN04490193_1472 | Not Available | Negative | 1498504 - 1498602 | 3305.14 |
| hypothetical protein | SAMN04490193_1473 | Not Available | Positive | 1499534 - 1499968 | 16369.2 |
| helix-turn-helix domain-containing protein | SAMN04490193_1477 | Not Available | Positive | 1501836 - 1502612 | 28229.5 |
| eama domain-containing membrane protein rard | SAMN04490193_1478 | Not Available | Positive | 1502716 - 1503621 | 31491.0 |
| transposase | SAMN04490193_1479 | Not Available | Positive | 1503859 - 1504188 | 12230.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





