Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, contains xre-family hth domain | SAMN04490193_1414 | Not Available | Negative | 1437302 - 1437604 | 11241.6 |
| hypothetical protein | SAMN04490193_1415 | Not Available | Positive | 1437851 - 1438108 | 9862.72 |
| dna topoisomerase-3 | SAMN04490193_1416 | Not Available | Negative | 1438146 - 1440113 | 71817.5 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_1418 | Not Available | Negative | 1440707 - 1441609 | 33465.5 |
| hypothetical protein | SAMN04490193_1419 | Not Available | Positive | 1441765 - 1442325 | 20598.4 |
| hypothetical protein | SAMN04490193_1420 | Not Available | Positive | 1442318 - 1442644 | 12254.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04490193_1421 | Not Available | Positive | 1442666 - 1443505 | 30404.1 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_1422 | Not Available | Negative | 1443551 - 1444459 | 33790.4 |
| putative intracellular protease/amidase | SAMN04490193_1423 | Not Available | Positive | 1444526 - 1445296 | 26965.8 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_1424 | Not Available | Positive | 1445300 - 1446493 | 40441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





