Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine efflux transporter rhta | SAMN04490193_1372 | Not Available | Negative | 1393049 - 1393975 | 32617.8 |
| hypothetical protein | SAMN04490193_1373 | Not Available | Negative | 1393975 - 1394331 | 13283.8 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN04490193_1374 | Not Available | Positive | 1394469 - 1395380 | 33898.0 |
| hypothetical protein | SAMN04490193_1375 | Not Available | Negative | 1395477 - 1396370 | 33982.3 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN04490193_1376 | Not Available | Negative | 1396367 - 1398040 | 63057.0 |
| hypothetical protein | SAMN04490193_1377 | Not Available | Negative | 1399105 - 1399821 | 26567.5 |
| methyltransferase domain-containing protein | SAMN04490193_1378 | Not Available | Negative | 1399818 - 1402877 | 114332.0 |
| hypothetical protein | SAMN04490193_1379 | Not Available | Negative | 1402874 - 1403419 | 20297.6 |
| atp-dependent dna helicase recq | SAMN04490193_1380 | Not Available | Positive | 1404578 - 1409719 | 193723.0 |
| integrating conjugative element relaxase, pfl_4751 family | SAMN04490193_1381 | Not Available | Negative | 1410064 - 1411788 | 64090.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





