Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04490193_1308 | Not Available | Positive | 1331801 - 1332655 | 30537.1 |
| protein of unknown function | SAMN04490193_1309 | Not Available | Positive | 1332758 - 1333576 | 29476.2 |
| predicted purr-regulated permease perm | SAMN04490193_1310 | Not Available | Positive | 1333648 - 1334709 | 38157.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04490193_1312 | Not Available | Negative | 1335742 - 1336557 | 30843.1 |
| orotidine-5'-phosphate decarboxylase | SAMN04490193_1313 | Not Available | Positive | 1336766 - 1337464 | 24679.2 |
| hypothetical protein | SAMN04490193_1314 | Not Available | Negative | 1337514 - 1338521 | 35638.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_1315 | Not Available | Positive | 1338750 - 1339511 | 25980.5 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04490193_1316 | Not Available | Positive | 1339714 - 1341126 | 51502.0 |
| methyl-accepting chemotaxis protein | SAMN04490193_1317 | Not Available | Positive | 1341242 - 1343209 | 69551.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04490193_1318 | Not Available | Negative | 1343246 - 1344058 | 30100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





