Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe | SAMN04490193_1245 | Not Available | Positive | 1268781 - 1269317 | 19865.2 |
| cytochrome c-type biogenesis protein ccmh | SAMN04490193_1246 | Not Available | Positive | 1269314 - 1269787 | 17464.1 |
| cytochrome c-type biogenesis protein ccmh | SAMN04490193_1247 | Not Available | Positive | 1269780 - 1270970 | 42943.6 |
| hypothetical protein | SAMN04490193_1248 | Not Available | Positive | 1270987 - 1271382 | 14105.6 |
| ribose 1,5-bisphosphokinase | SAMN04490193_1249 | Not Available | Positive | 1271984 - 1272556 | 20639.8 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04490193_1250 | Not Available | Positive | 1272921 - 1274405 | 52750.0 |
| predicted rna binding protein ycfa, dsrbd-like fold, hica-like mrna interferase family | SAMN04490193_1251 | Not Available | Positive | 1274648 - 1274836 | 7265.94 |
| predicted nuclease of the rnase h fold, hicb family | SAMN04490193_1252 | Not Available | Positive | 1274848 - 1275252 | 14717.5 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_1253 | Not Available | Negative | 1275249 - 1276445 | 42240.9 |
| sulfate transport system substrate-binding protein | SAMN04490193_1255 | Not Available | Negative | 1277257 - 1278261 | 36858.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





