Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | SAMN04490193_1215 | Not Available | Positive | 1240133 - 1240618 | 17681.4 |
| dna-binding transcriptional regulator, marr family | SAMN04490193_1216 | Not Available | Positive | 1240615 - 1241106 | 18227.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04490193_1217 | Not Available | Negative | 1241060 - 1243369 | 84774.6 |
| hypothetical protein | SAMN04490193_1218 | Not Available | Positive | 1243532 - 1244422 | 33863.3 |
| gaf domain-containing protein | SAMN04490193_1219 | Not Available | Positive | 1244419 - 1244901 | 17131.3 |
| two-component system, narl family, sensor histidine kinase evgs | SAMN04490193_1220 | Not Available | Negative | 1244928 - 1248563 | 134944.0 |
| two component transcriptional regulator, luxr family | SAMN04490193_1221 | Not Available | Negative | 1248572 - 1249192 | 23162.5 |
| response regulator receiver domain-containing protein | SAMN04490193_1222 | Not Available | Negative | 1249449 - 1249844 | 14611.1 |
| dgtpase | SAMN04490193_1223 | Not Available | Negative | 1250016 - 1251347 | 49994.6 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04490193_1224 | Not Available | Negative | 1251419 - 1252582 | 44058.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





