Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | SAMN04490193_1111 | Not Available | Positive | 1131157 - 1132176 | 36779.1 |
| peptide/nickel transport system substrate-binding protein | SAMN04490193_1112 | Not Available | Positive | 1132158 - 1133672 | 56466.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_1113 | Not Available | Negative | 1133872 - 1134612 | 26451.8 |
| phosphoglycolate phosphatase | SAMN04490193_1114 | Not Available | Negative | 1134769 - 1135440 | 24698.9 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMN04490193_1115 | Not Available | Negative | 1135445 - 1136143 | 26058.5 |
| cytosine/adenosine deaminase | SAMN04490193_1116 | Not Available | Negative | 1136208 - 1137539 | 47747.7 |
| methylthioribose-1-phosphate isomerase | SAMN04490193_1117 | Not Available | Positive | 1137649 - 1138719 | 38483.5 |
| transposase | SAMN04490193_1118 | Not Available | Positive | 1138913 - 1140118 | 46752.2 |
| dna gyrase subunit a | SAMN04490193_1120 | Not Available | Positive | 1140414 - 1143068 | 98058.0 |
| phosphoserine aminotransferase apoenzyme | SAMN04490193_1121 | Not Available | Positive | 1143155 - 1144366 | 44338.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





