Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, acrr family | SAMN04490193_1060 | Not Available | Positive | 1077383 - 1078090 | 26039.9 |
| beta-n-acetylhexosaminidase | SAMN04490193_1061 | Not Available | Positive | 1078227 - 1079234 | 36208.5 |
| swim zinc finger | SAMN04490193_1062 | Not Available | Negative | 1079231 - 1081924 | 101324.0 |
| peptidoglycan-binding protein, csiv | SAMN04490193_1063 | Not Available | Negative | 1081934 - 1082500 | 20754.6 |
| transcription-repair coupling factor | SAMN04490193_1064 | Not Available | Negative | 1082512 - 1085961 | 128460.0 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04490193_1065 | Not Available | Positive | 1086302 - 1087765 | 53212.6 |
| chalcone isomerase-like | SAMN04490193_1066 | Not Available | Negative | 1088103 - 1088636 | 20122.2 |
| nad(p) transhydrogenase | SAMN04490193_1067 | Not Available | Positive | 1088871 - 1090265 | 51024.9 |
| glycerophosphoryl diester phosphodiesterase | SAMN04490193_1068 | Not Available | Negative | 1090308 - 1091030 | 26874.5 |
| lipoprotein-releasing system permease protein | SAMN04490193_1070 | Not Available | Positive | 1091753 - 1093003 | 45271.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





