Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted metalloprotease, contains c-terminal pdz domain | SAMN04490193_1020 | Not Available | Positive | 1034700 - 1035920 | 45085.9 |
| protein of unknown function | SAMN04490193_1021 | Not Available | Negative | 1036109 - 1036459 | 12395.1 |
| trna(leu) c34 or u34 (ribose-2'-o)-methylase trml, contains spout domain | SAMN04490193_1022 | Not Available | Negative | 1036527 - 1036994 | 17188.7 |
| hnh endonuclease | SAMN04490193_1023 | Not Available | Negative | 1037163 - 1037537 | 14100.3 |
| hypothetical protein | SAMN04490193_1024 | Not Available | Positive | 1037644 - 1038564 | 34259.7 |
| spermine/spermidine synthase | SAMN04490193_1025 | Not Available | Negative | 1038605 - 1039291 | 24347.6 |
| hypothetical protein | SAMN04490193_1026 | Not Available | Positive | 1039325 - 1039648 | 10786.2 |
| cyclic nucleotide-binding domain-containing protein | SAMN04490193_1027 | Not Available | Negative | 1039645 - 1040118 | 17055.9 |
| oligopeptidase b | SAMN04490193_1028 | Not Available | Negative | 1040188 - 1042230 | 75866.9 |
| hypothetical protein | SAMN04490193_1029 | Not Available | Positive | 1042321 - 1042788 | 17735.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





