Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd-like signal output (hdod) domain, no enzymatic activity | SAMN04490193_0969 | Not Available | Negative | 987651 - 988472 | 30340.6 |
| hypothetical protein | SAMN04490193_0970 | Not Available | Negative | 988509 - 989450 | 33956.9 |
| antitoxin cptb | SAMN04490193_0971 | Not Available | Positive | 989590 - 989844 | 10253.4 |
| toxin cpta | SAMN04490193_0972 | Not Available | Positive | 989828 - 990274 | 17114.0 |
| l-aspartate oxidase | SAMN04490193_0973 | Not Available | Negative | 990243 - 991859 | 59668.0 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN04490193_0974 | Not Available | Positive | 992322 - 992903 | 22252.3 |
| anti sigma-e protein, rsea | SAMN04490193_0975 | Not Available | Positive | 992936 - 993523 | 20895.7 |
| sigma e regulatory protein, mucb/rseb | SAMN04490193_0976 | Not Available | Positive | 993540 - 994502 | 35397.9 |
| serine protease do | SAMN04490193_0977 | Not Available | Positive | 994737 - 996176 | 50688.2 |
| putative zn-dependent protease, contains tpr repeats | SAMN04490193_0978 | Not Available | Negative | 996244 - 997677 | 52990.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





