Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| effector protein | SAMN04490193_0886 | Not Available | Negative | 905557 - 907122 | 56087.4 |
| polysaccharide deacetylase | SAMN04490193_0887 | Not Available | Negative | 907242 - 908141 | 32966.2 |
| outer membrane porin, oprd family | SAMN04490193_0888 | Not Available | Negative | 908226 - 909476 | 45868.7 |
| hypothetical protein | SAMN04490193_0889 | Not Available | Negative | 909625 - 911238 | 61985.3 |
| molecular chaperone hscc | SAMN04490193_0890 | Not Available | Negative | 911249 - 912946 | 62602.7 |
| hypothetical protein | SAMN04490193_0891 | Not Available | Positive | 913289 - 914272 | 36717.6 |
| outer membrane protein, multidrug efflux system | SAMN04490193_0892 | Not Available | Negative | 914358 - 915815 | 52445.6 |
| multidrug efflux pump | SAMN04490193_0893 | Not Available | Negative | 915812 - 918973 | 112726.0 |
| membrane fusion protein, multidrug efflux system | SAMN04490193_0894 | Not Available | Negative | 918977 - 920125 | 40638.4 |
| transcriptional regulator, tetr family | SAMN04490193_0895 | Not Available | Positive | 920411 - 921043 | 24068.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





