Microbacterium hydrocarbonoxydans strain DSM 16089

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium hydrocarbonoxydans strain DSM 16089 is a rod-shaped bacterium primarily found in habitats contaminated with crude oil, such as crude-oil contaminated soil, oil contaminated soil, and permafrost. This strain is notable for its ability to thrive in environments heavily impacted by hydrocarbons, suggesting a role in the biodegradation of petroleum compounds. The genome of Microbacterium hydrocarbonoxydans strain DSM 16089 consists of a single replicon, which is characteristic of many bacterial species. The strain is cataloged under the accession number FNSQ00000000.1, allowing for further genetic and biochemical studies. The ecological significance of Microbacterium hydrocarbonoxydans lies in its potential to contribute to bioremediation processes in oil-polluted environments. Its presence in permafrost regions indicates a capacity to survive and function in extreme conditions, which may enhance its utility in cleaning up oil spills in similar climates. The strain's adaptation to oil-contaminated habitats positions it as a candidate for further research into biological methods for mitigating the impact of hydrocarbon pollution on ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium hydrocarbonoxydans
Strainstrain DSM 16089

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrude-oil contaminated soil; oil contaminated soil; permafrost
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium hydrocarbonoxydans strain DSM 16089 genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN04489807_0077Not AvailableNegative69688 - 7044326488.4
rna polymerase sigma-70 factor, ecf subfamilySAMN04489807_0078Not AvailablePositive70618 - 7162536587.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04489807_0079Not AvailablePositive71999 - 7275125330.8
fucose permeaseSAMN04489807_0080Not AvailableNegative73094 - 7431741384.3
hypothetical proteinSAMN04489807_0081Not AvailableNegative74385 - 746699710.5
hypothetical proteinSAMN04489807_0082Not AvailableNegative74672 - 7500111751.3
dna-binding transcriptional regulator, marr familySAMN04489807_0083Not AvailableNegative75075 - 7552116378.5
hypothetical proteinSAMN04489807_0084Not AvailablePositive75644 - 758959262.03
dna-binding transcriptional regulator, marr familySAMN04489807_0085Not AvailablePositive75895 - 7645221066.9
csbd-likeSAMN04489807_0086Not AvailableNegative76540 - 767105882.86

Displaying genes 41 – 50 of 3370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.