Microbacterium hydrocarbonoxydans strain DSM 16089

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium hydrocarbonoxydans strain DSM 16089 is a rod-shaped bacterium primarily found in habitats contaminated with crude oil, such as crude-oil contaminated soil, oil contaminated soil, and permafrost. This strain is notable for its ability to thrive in environments heavily impacted by hydrocarbons, suggesting a role in the biodegradation of petroleum compounds. The genome of Microbacterium hydrocarbonoxydans strain DSM 16089 consists of a single replicon, which is characteristic of many bacterial species. The strain is cataloged under the accession number FNSQ00000000.1, allowing for further genetic and biochemical studies. The ecological significance of Microbacterium hydrocarbonoxydans lies in its potential to contribute to bioremediation processes in oil-polluted environments. Its presence in permafrost regions indicates a capacity to survive and function in extreme conditions, which may enhance its utility in cleaning up oil spills in similar climates. The strain's adaptation to oil-contaminated habitats positions it as a candidate for further research into biological methods for mitigating the impact of hydrocarbon pollution on ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium hydrocarbonoxydans
Strainstrain DSM 16089

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrude-oil contaminated soil; oil contaminated soil; permafrost
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium hydrocarbonoxydans strain DSM 16089 genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized conserved protein yndb, ahsa1/start domainSAMN04489807_3387Not AvailableNegative3508110 - 350908736168.6
helix-turn-helix domain-containing proteinSAMN04489807_3388Not AvailableNegative3509089 - 350948414983.7
dna-binding transcriptional regulator, merr familySAMN04489807_3389Not AvailableNegative3510004 - 351035713442.2
sulfate permease, sulp familySAMN04489807_3390Not AvailablePositive3510550 - 351206753514.7
hypothetical proteinSAMN04489807_3391Not AvailablePositive3512341 - 351292220998.7
rhodanese-related sulfurtransferaseSAMN04489807_3392Not AvailableNegative3513960 - 351432512387.9
protein of unknown functionSAMN04489807_3393Not AvailableNegative3514358 - 351487618680.2
hypothetical proteinSAMN04489807_3394Not AvailableNegative3514897 - 351566725890.9
hydroxyacylglutathione hydrolaseSAMN04489807_3395Not AvailableNegative3515685 - 351709450602.5
thioredoxinSAMN04489807_3396Not AvailableNegative3517255 - 351762013320.9

Displaying genes 3301 – 3310 of 3370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.