Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | SAMN04490199_0963 | Not Available | Negative | 1010760 - 1011263 | 19031.0 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04490199_0964 | Not Available | Negative | 1011301 - 1011849 | 20775.8 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04490199_0965 | Not Available | Positive | 1011996 - 1012598 | 22537.9 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN04490199_0966 | Not Available | Positive | 1012634 - 1013158 | 18669.5 |
| hypothetical protein | SAMN04490199_0967 | Not Available | Positive | 1013155 - 1013370 | 7736.3 |
| hypothetical protein | SAMN04490199_0968 | Not Available | Positive | 1013533 - 1014000 | 16814.9 |
| formate-dependent phosphoribosylglycinamide formyltransferase | SAMN04490199_0969 | Not Available | Positive | 1014070 - 1015251 | 42295.8 |
| metabolite-proton symporter | SAMN04490199_0970 | Not Available | Negative | 1015374 - 1016684 | 45957.9 |
| mg2+ and co2+ transporter corb, contains duf21, cbs pair, and corc-hlyc domains | SAMN04490199_0971 | Not Available | Negative | 1016956 - 1018194 | 45694.4 |
| abc-type uncharacterized transport system, permease component | SAMN04490199_0972 | Not Available | Negative | 1018207 - 1019019 | 29444.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





