Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphocarrier protein hpr /phosphoenolpyruvate--protein phosphotransferase /pts system iia component, glc family | SAMN04490199_0953 | Not Available | Positive | 994256 - 996787 | 88598.7 |
| phosphotransferase system iib components | SAMN04490199_0954 | Not Available | Positive | 996790 - 997086 | 10158.4 |
| membrane-bound lytic murein transglycosylase f | SAMN04490199_0955 | Not Available | Negative | 997214 - 998674 | 54630.1 |
| phosphoribosylformylglycinamidine synthase | SAMN04490199_0956 | Not Available | Positive | 998961 - 1002857 | 140677.0 |
| hypothetical protein | SAMN04490199_0957 | Not Available | Positive | 1002862 - 1003173 | 11245.4 |
| pts system n-acetylglucosamine-specific iib component, glc family /pts system n-acetylglucosamine-specific iic component, glc family | SAMN04490199_0958 | Not Available | Negative | 1003355 - 1005046 | 59882.0 |
| phosphocarrier protein hpr /phosphoenolpyruvate--protein phosphotransferase /pts system iia component, glc family | SAMN04490199_0959 | Not Available | Negative | 1005073 - 1007583 | 88989.2 |
| glutamine--fructose-6-phosphate transaminase | SAMN04490199_0960 | Not Available | Negative | 1007620 - 1008642 | 36393.9 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN04490199_0961 | Not Available | Negative | 1008623 - 1009729 | 39248.4 |
| transcriptional regulator, gntr family | SAMN04490199_0962 | Not Available | Negative | 1009766 - 1010497 | 27087.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





