Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04490199_0933 | Not Available | Positive | 970251 - 971360 | 39731.1 |
| histidyl-trna synthetase | SAMN04490199_0934 | Not Available | Positive | 971384 - 972673 | 47908.6 |
| putative negative regulator of rcsb-dependent stress response | SAMN04490199_0935 | Not Available | Positive | 972715 - 973356 | 22717.8 |
| beta-barrel assembly machine subunit bamb | SAMN04490199_0936 | Not Available | Positive | 973295 - 974500 | 42931.1 |
| gtp-binding protein | SAMN04490199_0937 | Not Available | Positive | 974760 - 976229 | 54870.0 |
| 2-keto-4-methylthiobutyrate aminotransferase apoenzyme | SAMN04490199_0938 | Not Available | Positive | 976344 - 977492 | 42182.5 |
| carbon-nitrogen hydrolase | SAMN04490199_0939 | Not Available | Positive | 977480 - 978271 | 29741.1 |
| 2-isopropylmalate synthase | SAMN04490199_0940 | Not Available | Negative | 978444 - 980123 | 61834.0 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04490199_0941 | Not Available | Negative | 980447 - 981268 | 29331.8 |
| exodeoxyribonuclease vii large subunit | SAMN04490199_0942 | Not Available | Negative | 981272 - 982651 | 50953.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





