Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00860 | SAMN04490199_0913 | Not Available | Positive | 953107 - 954231 | Not Available |
| protein translocase subunit yajc | SAMN04490199_0914 | Not Available | Positive | 954275 - 954613 | 11896.7 |
| preprotein translocase subunit secd | SAMN04490199_0915 | Not Available | Positive | 954676 - 956544 | 67282.5 |
| protein translocase subunit secf | SAMN04490199_0916 | Not Available | Positive | 956554 - 957468 | 33185.8 |
| uncharacterized conserved protein ycfj, contains glycine zipper 2tm domain | SAMN04490199_0917 | Not Available | Positive | 957593 - 958135 | 18681.4 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04490199_0918 | Not Available | Negative | 958339 - 959154 | 29574.3 |
| trna (cytidine32/uridine32-2'-o)-methyltransferase | SAMN04490199_0919 | Not Available | Positive | 959300 - 960070 | 28380.2 |
| serine o-acetyltransferase | SAMN04490199_0920 | Not Available | Positive | 960073 - 960855 | 27902.6 |
| transcriptional regulator, badm/rrf2 family | SAMN04490199_0921 | Not Available | Positive | 961159 - 961650 | 17891.4 |
| cysteine desulfurase iscs | SAMN04490199_0922 | Not Available | Positive | 961701 - 962915 | 44462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





