Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SAMN04490199_0880 | Not Available | Positive | 924729 - 925106 | 13264.9 |
| hypothetical protein | SAMN04490199_0881 | Not Available | Negative | 925294 - 925521 | 7951.87 |
| ph domain-containing protein | SAMN04490199_0882 | Not Available | Negative | 925716 - 926087 | 13799.6 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04490199_0883 | Not Available | Positive | 926254 - 926889 | 22766.1 |
| hypothetical protein | SAMN04490199_0884 | Not Available | Negative | 926934 - 927263 | 12159.8 |
| hypothetical protein | SAMN04490199_0885 | Not Available | Negative | 927634 - 928146 | 18526.1 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_0886 | Not Available | Positive | 928270 - 929157 | 32610.6 |
| transcriptional regulator, contains xre-family hth domain | SAMN04490199_0888 | Not Available | Negative | 929606 - 930259 | 23733.6 |
| l-lysine exporter family protein lyse/argo | SAMN04490199_0889 | Not Available | Positive | 930805 - 931455 | 22711.7 |
| transposase | SAMN04490199_0890 | Not Available | Negative | 931721 - 933151 | 53805.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





