Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate aminotransferase | SAMN04490199_0870 | Not Available | Positive | 913927 - 915021 | 38913.9 |
| hypothetical protein | SAMN04490199_0871 | Not Available | Negative | 915081 - 915797 | 26087.5 |
| prevent-host-death family protein | SAMN04490199_0872 | Not Available | Negative | 916134 - 916367 | 8423.85 |
| cytochrome c | SAMN04490199_0873 | Not Available | Positive | 916597 - 918621 | 72775.2 |
| 4-aminobutyrate aminotransferase | SAMN04490199_0874 | Not Available | Negative | 918618 - 919868 | 44560.0 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490199_0875 | Not Available | Negative | 920012 - 921013 | 38025.0 |
| hypothetical protein | SAMN04490199_0876 | Not Available | Negative | 921148 - 923043 | 71321.6 |
| hypothetical protein | SAMN04490199_0877 | Not Available | Negative | 923167 - 923361 | 7026.17 |
| response regulator receiver domain-containing protein | SAMN04490199_0878 | Not Available | Negative | 923566 - 923946 | 13726.5 |
| ubiquinone biosynthesis monooxygenase coq7 | SAMN04490199_0879 | Not Available | Positive | 924192 - 924686 | 18584.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





