Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN04490199_0848 | Not Available | Negative | 890302 - 891198 | 32898.8 |
| holin-like protein | SAMN04490199_0849 | Not Available | Positive | 891297 - 891683 | 13947.0 |
| putative effector of murein hydrolase | SAMN04490199_0850 | Not Available | Positive | 891673 - 892359 | 24247.6 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN04490199_0851 | Not Available | Positive | 892509 - 893291 | 28120.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04490199_0852 | Not Available | Positive | 893291 - 894193 | 34338.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490199_0853 | Not Available | Positive | 894312 - 895223 | 32619.7 |
| protein of unknown function | SAMN04490199_0854 | Not Available | Positive | 895707 - 897497 | 64390.0 |
| protein of unknown function | SAMN04490199_0855 | Not Available | Positive | 897524 - 898882 | 50308.7 |
| atp-, maltotriose-and dna-dependent transcriptional regulator malt | SAMN04490199_0856 | Not Available | Positive | 899049 - 901556 | 92998.0 |
| transcriptional regulator, arac family | SAMN04490199_0857 | Not Available | Negative | 901553 - 902428 | 32248.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





