Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hopj type iii effector protein | SAMN04490199_0838 | Not Available | Negative | 884490 - 884828 | 11913.9 |
| hypothetical protein | SAMN04490199_0839 | Not Available | Negative | 884821 - 885117 | 11264.2 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMN04490199_0840 | Not Available | Negative | 885140 - 885511 | 13918.8 |
| gtp cyclohydrolase i | SAMN04490199_0841 | Not Available | Negative | 885514 - 886074 | 20988.7 |
| dihydromonapterin reductase / dihydrofolate reductase | SAMN04490199_0842 | Not Available | Negative | 886095 - 886805 | 25524.7 |
| hypothetical protein | SAMN04490199_0843 | Not Available | Negative | 886862 - 887422 | 20626.0 |
| dna-binding transcriptional regulator, merr family | SAMN04490199_0844 | Not Available | Positive | 887640 - 888599 | 35571.0 |
| hypothetical protein | SAMN04490199_0845 | Not Available | Negative | 888603 - 889208 | 23095.7 |
| pas domain s-box-containing protein | SAMN04490199_0846 | Not Available | Negative | 889269 - 889736 | 17308.6 |
| mioc protein | SAMN04490199_0847 | Not Available | Positive | 889866 - 890321 | 15980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





