Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04490199_0802 | Not Available | Positive | 848259 - 849251 | 37457.7 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_0803 | Not Available | Negative | 849385 - 850260 | 32011.0 |
| muconate cycloisomerase | SAMN04490199_0804 | Not Available | Positive | 850375 - 851502 | 40279.9 |
| muconolactone delta-isomerase | SAMN04490199_0805 | Not Available | Positive | 851515 - 851805 | 11141.5 |
| catechol 1,2-dioxygenase | SAMN04490199_0806 | Not Available | Positive | 851847 - 852776 | 34614.4 |
| dna-binding transcriptional regulator, lrp family | SAMN04490199_0807 | Not Available | Negative | 852904 - 853377 | 17942.7 |
| kynureninase | SAMN04490199_0808 | Not Available | Positive | 853522 - 854772 | 45683.6 |
| l-asparagine transporter | SAMN04490199_0809 | Not Available | Positive | 855409 - 856815 | 50829.3 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_0810 | Not Available | Negative | 856761 - 857657 | 32664.6 |
| hypothetical protein | SAMN04490199_0811 | Not Available | Positive | 857842 - 858606 | 26131.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





