Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN04490199_0792 | Not Available | Negative | 837562 - 838509 | 35393.7 |
| methylmalonate-semialdehyde dehydrogenase | SAMN04490199_0793 | Not Available | Positive | 838641 - 840158 | 53842.0 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04490199_0794 | Not Available | Positive | 840174 - 841061 | 30056.3 |
| hypothetical protein | SAMN04490199_0795 | Not Available | Negative | 841112 - 841456 | 13124.8 |
| kynurenine formamidase | SAMN04490199_0796 | Not Available | Positive | 841842 - 842492 | 23624.3 |
| tryptophan 2,3-dioxygenase | SAMN04490199_0797 | Not Available | Positive | 842489 - 843346 | 32973.4 |
| aromatic amino acid:proton symporter, aat family | SAMN04490199_0798 | Not Available | Negative | 843429 - 844832 | 50713.3 |
| anthranilate 1,2-dioxygenase reductase subunit | SAMN04490199_0799 | Not Available | Negative | 844906 - 845913 | 37139.1 |
| anthranilate 1,2-dioxygenase | SAMN04490199_0800 | Not Available | Negative | 846064 - 846558 | 19550.2 |
| anthranilate 1,2-dioxygenase | SAMN04490199_0801 | Not Available | Negative | 846555 - 847946 | 52530.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





