Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoxide reductase heme-binding subunit yedz | SAMN04490199_0777 | Not Available | Positive | 818640 - 819260 | 23233.6 |
| Trna-ile | Not Available | Not Available | Positive | 821424 - 821500 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 821528 - 821603 | Not Available |
| dna helicase/exodeoxyribonuclease v, gamma subunit | SAMN04490199_0783 | Not Available | Positive | 825150 - 828602 | 129067.0 |
| dna helicase/exodeoxyribonuclease v, beta subunit | SAMN04490199_0784 | Not Available | Positive | 828599 - 832273 | 136403.0 |
| dna helicase/exodeoxyribonuclease v, alpha subunit | SAMN04490199_0785 | Not Available | Positive | 832270 - 834339 | 75204.7 |
| protein of unknown function | SAMN04490199_0786 | Not Available | Positive | 834483 - 835058 | 20642.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490199_0787 | Not Available | Positive | 835055 - 836317 | 45439.8 |
| outer membrane protein ompa | SAMN04490199_0788 | Not Available | Positive | 836322 - 836813 | 17285.7 |
| protein of unknown function | SAMN04490199_0790 | Not Available | Negative | 836957 - 837247 | 10426.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





