Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_0756 | Not Available | Negative | 799623 - 799799 | 6923.69 |
| glutamyl-q trna(asp) synthetase | SAMN04490199_0757 | Not Available | Negative | 799862 - 800749 | 33346.7 |
| transcriptional regulator, trar/dksa family | SAMN04490199_0758 | Not Available | Negative | 800834 - 801277 | 17112.4 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04490199_0759 | Not Available | Positive | 801599 - 802771 | 42589.7 |
| sugar fermentation stimulation protein a | SAMN04490199_0760 | Not Available | Positive | 802771 - 803484 | 26155.3 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN04490199_0761 | Not Available | Negative | 803481 - 803798 | 11527.7 |
| iron complex transport system substrate-binding protein | SAMN04490199_0762 | Not Available | Positive | 803955 - 804833 | 30542.0 |
| iron complex transport system permease protein | SAMN04490199_0763 | Not Available | Positive | 804830 - 805867 | 35503.9 |
| iron complex transport system atp-binding protein | SAMN04490199_0764 | Not Available | Positive | 805867 - 806634 | 27880.9 |
| dna transformation protein | SAMN04490199_0766 | Not Available | Negative | 806855 - 807127 | 10149.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





