Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 740432 - 740825 | Not Available |
| hypothetical protein | SAMN04490199_0703 | Not Available | Negative | 740928 - 741212 | 9663.42 |
| d-lactate dehydrogenase | SAMN04490199_0704 | Not Available | Negative | 741350 - 744160 | 102084.0 |
| l-lactate dehydrogenase complex protein lldg | SAMN04490199_0705 | Not Available | Negative | 744157 - 744828 | 25012.1 |
| l-lactate dehydrogenase complex protein lldf | SAMN04490199_0706 | Not Available | Negative | 744828 - 746279 | 53267.2 |
| l-lactate dehydrogenase complex protein llde | SAMN04490199_0707 | Not Available | Negative | 746276 - 747100 | 30109.8 |
| lactate permease | SAMN04490199_0708 | Not Available | Negative | 747237 - 748931 | 59628.0 |
| transcriptional regulator, gntr family | SAMN04490199_0709 | Not Available | Positive | 749193 - 749960 | 28752.3 |
| ssra-binding protein | SAMN04490199_0710 | Not Available | Negative | 749999 - 750481 | 18307.1 |
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN04490199_0711 | Not Available | Positive | 750650 - 751084 | 15815.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





