Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04490199_0681 | Not Available | Negative | 715235 - 716602 | 51018.6 |
| integrase | SAMN04490199_0683 | Not Available | Negative | 717509 - 718765 | 47331.3 |
| hypothetical protein | SAMN04490199_0684 | Not Available | Negative | 719736 - 720584 | 31595.0 |
| hypothetical protein | SAMN04490199_0685 | Not Available | Positive | 721072 - 721236 | 6400.14 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04490199_0686 | Not Available | Positive | 721277 - 721588 | 11782.3 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN04490199_0687 | Not Available | Positive | 721560 - 722612 | 39222.2 |
| protein of unknown function duf262 | SAMN04490199_0688 | Not Available | Positive | 723005 - 724072 | 41503.5 |
| hypothetical protein | SAMN04490199_0689 | Not Available | Positive | 724077 - 724724 | 24401.5 |
| transposase | SAMN04490199_0690 | Not Available | Negative | 725051 - 726424 | 52493.5 |
| hypothetical protein | SAMN04490199_0691 | Not Available | Positive | 726644 - 727297 | 24291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





