Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_0640 | Not Available | Negative | 668206 - 668388 | 6456.78 |
| dna-binding transcriptional regulator, fadr family | SAMN04490199_0641 | Not Available | Negative | 668476 - 669189 | 26768.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN04490199_0642 | Not Available | Positive | 669475 - 670716 | 44435.1 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN04490199_0643 | Not Available | Positive | 670776 - 671717 | 33365.4 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN04490199_0644 | Not Available | Positive | 671721 - 672998 | 45606.2 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN04490199_0645 | Not Available | Positive | 672995 - 673750 | 28263.0 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN04490199_0646 | Not Available | Positive | 673747 - 674469 | 26132.8 |
| outer membrane porin, oprd family | SAMN04490199_0647 | Not Available | Positive | 674591 - 675832 | 45345.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490199_0648 | Not Available | Positive | 675959 - 676801 | 29773.3 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04490199_0649 | Not Available | Positive | 676864 - 679056 | 79078.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





