Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_0630 | Not Available | Positive | 659782 - 660039 | 9720.3 |
| hypothetical protein | SAMN04490199_0631 | Not Available | Positive | 660072 - 660266 | 7116.79 |
| d-3-phosphoglycerate dehydrogenase | SAMN04490199_0632 | Not Available | Negative | 660277 - 661317 | 37098.4 |
| broad specificity phosphatase phoe | SAMN04490199_0633 | Not Available | Negative | 661566 - 662129 | 20939.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN04490199_0634 | Not Available | Negative | 662126 - 663178 | 38374.3 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_0635 | Not Available | Positive | 663295 - 664182 | 31600.7 |
| major facilitator superfamily protein | SAMN04490199_0636 | Not Available | Positive | 664324 - 665715 | 47859.2 |
| arac-type dna-binding protein | SAMN04490199_0637 | Not Available | Positive | 665727 - 666500 | 28930.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04490199_0638 | Not Available | Negative | 666597 - 667337 | 26187.3 |
| shikimate dehydrogenase | SAMN04490199_0639 | Not Available | Negative | 667367 - 668197 | 29434.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





