Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_0620 | Not Available | Positive | 647299 - 647616 | 11613.1 |
| hypothetical protein | SAMN04490199_0621 | Not Available | Negative | 647623 - 649446 | 67469.9 |
| tigr00645 family protein | SAMN04490199_0622 | Not Available | Positive | 649610 - 650098 | 18412.2 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04490199_0623 | Not Available | Negative | 650114 - 651553 | 53294.1 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN04490199_0624 | Not Available | Negative | 651712 - 653874 | 76511.4 |
| hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant) | SAMN04490199_0625 | Not Available | Negative | 654006 - 655148 | 41754.3 |
| two-component system, chemotaxis family, response regulator chev | SAMN04490199_0626 | Not Available | Negative | 655225 - 656157 | 34557.6 |
| hypothetical protein | SAMN04490199_0627 | Not Available | Positive | 656708 - 658180 | 54221.4 |
| ankyrin repeat-containing protein | SAMN04490199_0628 | Not Available | Positive | 658162 - 658821 | 24392.4 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04490199_0629 | Not Available | Negative | 658787 - 659662 | 33897.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





