Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | SAMN04490199_0610 | Not Available | Negative | 631689 - 632942 | 44856.6 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490199_0611 | Not Available | Negative | 633185 - 637036 | 145421.0 |
| atp-binding cassette protein, chvd family | SAMN04490199_0612 | Not Available | Positive | 637322 - 638986 | 61463.0 |
| glutamate dehydrogenase (nadp) | SAMN04490199_0613 | Not Available | Positive | 639286 - 640623 | 48383.1 |
| transcription elongation factor, grea/greb family | SAMN04490199_0614 | Not Available | Negative | 640620 - 641117 | 18195.2 |
| hypothetical protein | SAMN04490199_0615 | Not Available | Negative | 641188 - 641544 | 13711.9 |
| isochorismate pyruvate lyase | SAMN04490199_0616 | Not Available | Negative | 641639 - 641944 | 11224.4 |
| protein of unknown function | SAMN04490199_0617 | Not Available | Negative | 641979 - 643832 | 70220.2 |
| protein of unknown function | SAMN04490199_0618 | Not Available | Negative | 643925 - 644413 | 17068.1 |
| predicted atp-dependent protease | SAMN04490199_0619 | Not Available | Positive | 644681 - 647119 | 89145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





