Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transporter/malic acid transport protein | SAMN04490199_6409 | Not Available | Negative | 6927716 - 6928864 | 41129.8 |
| predicted arabinose efflux permease, mfs family | SAMN04490199_6410 | Not Available | Negative | 6928972 - 6930165 | 41407.0 |
| regulatory protein, tetr family | SAMN04490199_6411 | Not Available | Positive | 6930257 - 6930802 | 19655.6 |
| abc-2 type transport system permease protein | SAMN04490199_6412 | Not Available | Negative | 6930872 - 6931651 | 28554.0 |
| abc-2 type transport system atp-binding protein | SAMN04490199_6413 | Not Available | Negative | 6931648 - 6932580 | 34370.8 |
| glutathione s-transferase | SAMN04490199_6414 | Not Available | Negative | 6932715 - 6933332 | 23114.6 |
| transglutaminase-like superfamily protein | SAMN04490199_6415 | Not Available | Negative | 6933389 - 6934048 | 24444.8 |
| acyl-coa dehydrogenase | SAMN04490199_6416 | Not Available | Positive | 6934251 - 6936698 | 88437.3 |
| hypothetical protein | SAMN04490199_6417 | Not Available | Positive | 6936773 - 6937180 | 15856.9 |
| transposase and inactivated derivatives, is30 family | SAMN04490199_6418 | Not Available | Negative | 6937281 - 6938459 | 44930.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





