Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | SAMN04490199_6388 | Not Available | Positive | 6905530 - 6906693 | 43122.4 |
| k+-transporting atpase atpase a chain | SAMN04490199_6389 | Not Available | Positive | 6907423 - 6909129 | 60661.0 |
| k+-transporting atpase atpase c chain | SAMN04490199_6390 | Not Available | Positive | 6909140 - 6909799 | 23425.2 |
| k+-transporting atpase atpase b chain | SAMN04490199_6391 | Not Available | Positive | 6909812 - 6911881 | 72476.0 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN04490199_6392 | Not Available | Positive | 6911907 - 6914663 | 100042.0 |
| two-component system, ompr family, kdp operon response regulator kdpe | SAMN04490199_6393 | Not Available | Positive | 6914660 - 6915352 | 25716.1 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_6394 | Not Available | Negative | 6915312 - 6916235 | 33812.9 |
| major facilitator superfamily protein | SAMN04490199_6395 | Not Available | Positive | 6916342 - 6917862 | 52874.3 |
| Trna-asp | Not Available | Not Available | Positive | 6917943 - 6918019 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 6918039 - 6918114 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





